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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911524.1_cds_XP_016461508.1_54822
CDS Infomation

[gene=LOC107784839] [db_xref=GeneID:107784839] [protein=hippocampus abundant transcript 1 protein-like] [protein_id=XP_016461508.1] [location=complement(join(164418..164477,164655..164725,164807..164885,165002..165043,165127..165180,165266..165298,165468..165548,165696..165782,166026..166101,166515..166717,166823..166945,167662..167774,167869..167980,171194..171358))] [gbkey=CDS]
Sequence

ATGGATAAGTTGGGAAGTTTGAAGCACCTGTTTGTGACGGTATTTATGTCGCAGTTGGCG
ACGTTCCTGGTAACTCCGGCCATGCCTGATGTAACTATGATGGCTCTGTGCCCTGGTCAA
GACCAGTGTTCTCTCGCCATTTACCTCTCTGGTTTCCAACAAGCGATAATAGGAATTGGT
TTAGTGTTAATGATGCCAATAATTGGGAATTTGTGTGATGTCTATGGAAGGAAAGCTTTG
CTCACAATCCCCGTTACTCTGTCCATCATTCCCCCAGTCATATTGGCATATAGGAGGACC
AACAACTTTTACTATGTGTACTATGTGCTCCGGACGCTCACTGGCATGATATGTGATGGT
GGTATTCAGTGTGTGGCCCTTGCTTATGTGGCAGACAACATGTCTCGAGCAAAGCGTGCC
TCTGCTATTGGAATTTTGGCTGGTGTTGGATCTGCTGCATTTGTCTGTGGAACCTTAGCT
GATCACTTTCTCTCCACTTCTCAGATATTTCTGGTAGCAGCAATTGCATCAACAGTTGCT
TCTGTATACATGCAAATATTTTTAGAGGATACAGCTTGCTTTGAAGATTCTACTGAGCAG
CCAATTTTGAAAAGTGAGATGGAAAATGACGAATTGGATTGCGAGACAGCAAAGATTATA
AAGGTGTTCAAGAAAGTTCCATCCCTGAAGGATATCATTTGCTTTCTTAAGAAGAGTGCT
ACATTTTCACTTGCAGCATCTGTTGCTTTCTTGAATAGTGTTGCAGAAGGTGGAGAACAA
GCTCCCTTTCAGTACTTCTTAAAGGCTCGATTTCACTTCAAGAAAGATAACTTTGCTGAT
GTGATGCTTATAGCCAACATTTGCTCTGCAAGTTCTCAGTTGCTCCTCATGCCTATGTTG
GCTCCTCTTATAGGAGAGGAGGTCCTGCTATGCTTAGGACTGACTGCTGGATTTACAAAC
CTGCTTATTGACAGTATAGCACGGTCAATTTGGATCCCTTATACTGCTGCATTGCTGCCT
ATTTTCACCTCCCTTGTGAAACCCTCTCTTCAAAGCATTGTCTCAAAACAAGTTGGGCCT
AATGAACAGGGAATTGCTCAAGGTTGCATTTCAAGTATAAGTTCCGTAGCTAATATTCTC
TCCCCATTAATGTATAGTCCTCTAACAGCCTTGTTCCTTTCAGAGAAAGCTCCATTTCCA
TACCCTGGCTTTAGCATCCTGTGCATTGGCCTTGCTTGGTTGATAGCCATTATTCCCAGT
GCAATGATAAAGACAATTCCTCTCATCTCAAGACAGTAA

Peptide Sequence

PEP ID

XP_016461508.1
PEP Infomation

PREDICTED: hippocampus abundant transcript 1 protein-like [Nicotiana tabacum]
Sequence

MDKLGSLKHLFVTVFMSQLATFLVTPAMPDVTMMALCPGQDQCSLAIYLSGFQQAIIGIG
LVLMMPIIGNLCDVYGRKALLTIPVTLSIIPPVILAYRRTNNFYYVYYVLRTLTGMICDG
GIQCVALAYVADNMSRAKRASAIGILAGVGSAAFVCGTLADHFLSTSQIFLVAAIASTVA
SVYMQIFLEDTACFEDSTEQPILKSEMENDELDCETAKIIKVFKKVPSLKDIICFLKKSA
TFSLAASVAFLNSVAEGGEQAPFQYFLKARFHFKKDNFADVMLIANICSASSQLLLMPML
APLIGEEVLLCLGLTAGFTNLLIDSIARSIWIPYTAALLPIFTSLVKPSLQSIVSKQVGP
NEQGIAQGCISSISSVANILSPLMYSPLTALFLSEKAPFPYPGFSILCIGLAWLIAIIPS
AMIKTIPLISRQ

Transcript Sequence

Gene sequence data has not been registered.